BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028G03LP1|AL428954
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1795 1760 0.0
>3x_Contig1795
Length = 38452
Score = 1760 bits (888), Expect = 0.0
Identities = 898/900 (99%), Gaps = 1/900 (0%)
Strand = Plus / Minus
Query: 1 agtcaagatcacattgtgtctgctgctaatcgatactatgagcataccatatgatgagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24062 agtcaagatcacattgtgtctgctgctaatcgatactatgagcataccatatgatgagga 24003
Query: 61 aactcagccgttagtccctagaggggtgacaaggcgaagggataattcggtggctagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24002 aactcagccgttagtccctagaggggtgacaaggcgaagggataattcggtggctagttt 23943
Query: 121 tttggcacggggacgaagtaatactataaacagtttaaaaagtggcttcgaaacagtgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23942 tttggcacggggacgaagtaatactataaacagtttaaaaagtggcttcgaaacagtgaa 23883
Query: 181 gaaacataaaaatgagttctggttactaataattggaagtttggtgttatatcttgggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23882 gaaacataaaaatgagttctggttactaataattggaagtttggtgttatatcttgggtt 23823
Query: 241 cactttggcatttttaccgagaacgtcactttcaagggacttcagacgattacacttcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23822 cactttggcatttttaccgagaacgtcactttcaagggacttcagacgattacacttcag 23763
Query: 301 caagttaacaaaatctgaggcattcagaatttatgtcgagactctcatgaaggaaaacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23762 caagttaacaaaatctgaggcattcagaatttatgtcgagactctcatgaaggaaaacaa 23703
Query: 361 atgtcaggaccatttgagcaactatacttcccacattcattgggctggtgatgctcatgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23702 atgtcaggaccatttgagcaactatacttcccacattcattgggctggtgatgctcatgc 23643
Query: 421 gttggagtatactatcaatgaattaagcatgcttggttttacacctaagcttgaagagta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23642 gttggagtatactatcaatgaattaagcatgcttggttttacacctaagcttgaagagta 23583
Query: 481 tcacacttggttgaatgaaccagtgaaaacggaagtgacactctgggatcagaatcatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23582 tcacacttggttgaatgaaccagtgaaaacggaagtgacactctgggatcagaatcatct 23523
Query: 541 tttatacaacgcaagtttgacggaagattatatttctgaaggcgaagataatgattcgtt 600
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23522 tttatacaacgcaagtatgacggaagattatatttctgaaggcgaagataatgattcgtt 23463
Query: 601 caaaaaggtttttgggtttcatggcttttctgcaaatggtacagtaagatcggaatatgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23462 caaaaaggtttttgggtttcatggcttttctgcaaatggtacagtaagatcggaatatgt 23403
Query: 661 ttactgcaactatgggactatcgaggactatgaacaccttctttcccataacgtcaaact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23402 ttactgcaactatgggactatcgaggactatgaacaccttctttcccataacgtcaaact 23343
Query: 721 tgagggtaaaatacacgttattaggtatggggctataatgaaaggaattgtcgttaaaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23342 tgagggtaaaatacacgttattaggtatggggctataatgaaaggaattgtcgttaaaaa 23283
Query: 781 tgcggaaacatttggcgccctgggtgctattttgtacactgacagttttgatgatggttt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23282 tgcggaaacatttggcgccctgggtgctattttgtacactgacagttttgatgatggttt 23223
Query: 841 gattactgaaaacaacggctataaaccttatccggaaggacctgcaa-gcacgagagttc 899
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 23222 gattactgaaaacaacggctataaaccttatccggaaggacctgcaaggcacgagagttc 23163
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5866
Number of Sequences: 1807
Number of extensions: 5866
Number of successful extensions: 20
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)